Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6428

Experiment: Sorted No BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14795 and 14796 are separated by 854 nucleotides mRNA_6427: 14795 - KOG0516 Dystonin, GAS (Growth-arrest-specific protein), and related proteins, at 773,204 to 778,326 14795 mRNA_6428: 14796 - KOG2208 Vigilin, at 779,181 to 783,068 14796

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
remove
778,240 + +1.1
778,263 + -0.5
778,290 + -1.8
778,647 - +0.5
778,742 + +1.4
778,785 + +0.9
778,861 + +1.0
778,883 - -1.2
778,883 - -0.2
778,909 - +1.5
778,913 + +0.2
779,053 - -0.5
779,541 + +1.3
779,809 + 14796 mRNA_6428 0.16 +0.8
780,038 + 14796 mRNA_6428 0.22 -0.5
780,040 - 14796 mRNA_6428 0.22 -0.7
780,156 - 14796 mRNA_6428 0.25 -0.3
780,248 - 14796 mRNA_6428 0.27 +0.9
780,273 + 14796 mRNA_6428 0.28 +0.7
780,389 - 14796 mRNA_6428 0.31 +1.4
780,422 + 14796 mRNA_6428 0.32 +0.4
780,499 - 14796 mRNA_6428 0.34 +1.2
780,654 - 14796 mRNA_6428 0.38 -0.8
780,666 - 14796 mRNA_6428 0.38 +0.3
780,945 - 14796 mRNA_6428 0.45 +0.8
781,097 - 14796 mRNA_6428 0.49 +2.1
781,104 + 14796 mRNA_6428 0.49 +0.2
781,126 + 14796 mRNA_6428 0.50 -1.0
781,245 + 14796 mRNA_6428 0.53 -0.2
781,261 + 14796 mRNA_6428 0.53 -0.7
781,261 + 14796 mRNA_6428 0.53 +1.6
781,443 + 14796 mRNA_6428 0.58 +1.1
781,536 + 14796 mRNA_6428 0.61 -1.8
781,548 + 14796 mRNA_6428 0.61 +0.4
781,567 - 14796 mRNA_6428 0.61 +0.7
781,573 + 14796 mRNA_6428 0.62 +0.8
781,606 + 14796 mRNA_6428 0.62 -1.3
781,661 - 14796 mRNA_6428 0.64 +1.0
781,701 - 14796 mRNA_6428 0.65 +1.2
781,795 - 14796 mRNA_6428 0.67 +0.1
781,888 + 14796 mRNA_6428 0.70 -0.8
782,021 - 14796 mRNA_6428 0.73 -0.2
782,024 + 14796 mRNA_6428 0.73 +1.8
782,143 + 14796 mRNA_6428 0.76 +1.2
782,268 - 14796 mRNA_6428 0.79 +1.5
782,387 + 14796 mRNA_6428 0.82 -0.3
782,389 - 14796 mRNA_6428 0.83 +1.1
782,428 - 14796 mRNA_6428 0.84 -0.5
783,050 - +1.1
783,168 - +0.6
783,195 - +1.2
783,295 - +0.9
783,483 - -0.6
783,489 + +0.1
783,500 + +0.0
783,601 - +0.6
783,618 + +1.7
783,628 + +0.7
783,630 - +0.8
783,632 - +0.9
783,639 + +0.9
783,640 + +1.6
783,647 + -0.5
783,664 + +1.5
783,664 + +0.6
783,674 + +1.1
783,676 - -0.2
783,679 + -0.3
783,701 + +0.3
783,777 - +0.0
783,812 - -0.6
783,924 - +0.9
783,947 - +0.1
783,949 - -1.2
783,954 + -1.8
783,979 + +0.5
783,988 - +0.1
784,012 - +0.8
784,055 + +0.0

Or see this region's nucleotide sequence