Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6741

Experiment: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15108 and 15109 are separated by 210 nucleotides15109 and 15110 are separated by 628 nucleotides mRNA_6740: 15108 - Interpro Dynactin subunit p22, at 37,407 to 38,257 15108 mRNA_6741: 15109 - K01657 trpE anthranilate synthase component I, at 38,468 to 40,696 15109 mRNA_6742: 15110 - Hypothetical Protein, at 41,325 to 41,801 15110

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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38,263 - +0.3
38,271 + +0.5
38,283 - -0.1
38,371 - +0.8
38,374 - +0.6
38,393 - +0.4
38,398 + -1.9
38,408 + -0.1
40,748 - -0.3
40,751 + -1.7
40,769 - +1.2
40,771 + -1.6
40,909 + -0.4
40,911 - -0.3
40,923 - +0.0

Or see this region's nucleotide sequence