Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6950

Experiment: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15318 and 15319 are separated by 586 nucleotides mRNA_6950: 15318 - KOG4505 Na+/H+ antiporter, at 508,659 to 510,404 15318 mRNA_6951: 15319 - ProSiteProfiles-Ribonuclease III family domain profile.-PS50142,SUPERFAMILY--SSF69065, at 510,991 to 511,843 15319

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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507,850 + -1.2
507,964 - -0.3
507,991 - +0.3
508,079 - +0.8
508,148 + -2.0
508,263 - +0.0
508,272 - -1.8
508,274 - -2.3
508,275 - -1.7
508,276 - -1.8
508,288 + -0.8
508,290 - +0.8
508,296 - -0.0
508,297 - +0.2
508,299 - -0.8
508,304 + +1.0
508,304 + -1.0
508,310 + -0.2
508,319 + +1.0
508,328 + -0.4
508,449 - -1.6
508,449 - +0.2
508,473 + -0.1
508,479 - -0.3
508,610 + -3.1
508,766 + -4.4
509,050 - 15318 mRNA_6950 0.22 -3.6
509,183 - 15318 mRNA_6950 0.30 -1.6
509,305 + 15318 mRNA_6950 0.37 -1.1
509,368 + 15318 mRNA_6950 0.41 -3.1
509,464 + 15318 mRNA_6950 0.46 -3.7
509,810 + 15318 mRNA_6950 0.66 -3.3
510,074 + 15318 mRNA_6950 0.81 -3.9
510,235 + -1.8
510,523 + +0.4
510,527 - -0.5
510,617 - -0.4
510,634 + +1.0
510,652 - -0.8
510,787 - -2.1
510,787 - -0.3
510,788 - +0.3
511,382 + 15319 mRNA_6951 0.46 -0.0
511,393 + 15319 mRNA_6951 0.47 -0.4

Or see this region's nucleotide sequence