Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7114

Experiment: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15481 and 15482 are separated by 889 nucleotides15482 and 15483 are separated by 637 nucleotides mRNA_7113: 15481 - Hypothetical Protein, at 911,603 to 912,181 15481 mRNA_7114: 15482 - K00383 GSR, gor glutathione reductase (NADPH), at 913,071 to 914,998 15482 mRNA_7115: 15483 - K00297 metF, MTHFR methylenetetrahydrofolate reductase (NADPH), at 915,636 to 918,075 15483

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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912,104 - 15481 mRNA_7113 0.87 +0.6
912,522 - +0.0
912,549 + -1.5
912,550 - -0.5
912,557 - +0.4
912,601 - -0.3
912,615 + -2.4
912,632 + +0.5
912,709 + -0.1
912,729 + +0.3
912,750 - +0.0
915,355 + +0.2
915,364 - -0.9
915,367 - -0.2
915,367 + +0.8
915,371 + -0.3
915,371 + -0.1
915,372 - -1.4
915,382 + +0.1
915,387 + -1.9
915,404 + +1.0
915,492 - +0.5
915,647 + -0.1
915,672 - -0.6
915,794 - -3.2

Or see this region's nucleotide sequence