Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7319

Experiment: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_7319: 15687 - Hypothetical Protein, at 1,388,074 to 1,389,867 15687

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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1,387,097 - -0.8
1,387,118 + -0.8
1,387,126 - +0.1
1,387,158 - -0.4
1,387,160 - -1.3
1,387,232 - -0.1
1,387,245 - +0.9
1,387,301 - +1.4
1,387,308 + +0.1
1,387,319 - -0.1
1,387,507 + -0.2
1,387,598 + +1.1
1,387,599 + +0.5
1,387,648 + +0.4
1,387,732 + -1.2
1,387,759 - -2.8
1,387,765 - +0.3
1,387,847 - -0.4
1,387,850 - +0.1
1,387,883 - +0.8
1,387,883 - -1.3
1,388,044 - -1.1
1,388,050 - -0.9
1,388,107 - -0.4
1,388,191 - -0.9
1,388,195 - -0.8
1,388,371 - 15687 mRNA_7319 0.17 -0.5
1,388,377 - 15687 mRNA_7319 0.17 -2.0
1,388,377 - 15687 mRNA_7319 0.17 +0.3
1,388,513 - 15687 mRNA_7319 0.24 -0.0
1,388,583 - 15687 mRNA_7319 0.28 +1.0
1,388,653 - 15687 mRNA_7319 0.32 +0.2
1,388,724 - 15687 mRNA_7319 0.36 +0.4
1,388,758 - 15687 mRNA_7319 0.38 +0.6
1,388,790 - 15687 mRNA_7319 0.40 -0.7
1,388,820 - 15687 mRNA_7319 0.42 -0.6
1,388,911 - 15687 mRNA_7319 0.47 -2.0
1,388,927 + 15687 mRNA_7319 0.48 -0.4
1,388,979 - 15687 mRNA_7319 0.50 -0.0
1,389,046 - 15687 mRNA_7319 0.54 +1.8
1,389,085 - 15687 mRNA_7319 0.56 +0.2
1,389,119 - 15687 mRNA_7319 0.58 -0.8
1,389,139 - 15687 mRNA_7319 0.59 -1.3
1,389,212 - 15687 mRNA_7319 0.63 -1.3
1,389,234 - 15687 mRNA_7319 0.65 +1.3
1,389,324 - 15687 mRNA_7319 0.70 -0.0
1,389,338 - 15687 mRNA_7319 0.70 +0.3
1,389,479 - 15687 mRNA_7319 0.78 +0.8
1,389,523 - 15687 mRNA_7319 0.81 -0.5
1,389,634 - 15687 mRNA_7319 0.87 -0.8
1,389,635 + 15687 mRNA_7319 0.87 -0.1
1,389,644 - 15687 mRNA_7319 0.88 -0.5
1,389,665 - 15687 mRNA_7319 0.89 -1.4
1,389,722 - -0.7
1,389,757 - -0.5
1,389,820 + +0.8
1,389,827 + +0.7
1,389,873 - +0.1
1,389,873 - -0.1
1,389,887 - +1.2
1,389,966 - -0.7
1,390,024 + -1.8
1,390,025 + -2.1
1,390,027 - +0.5
1,390,134 - -0.1
1,390,146 - +0.5
1,390,160 - +0.6
1,390,163 - +0.4
1,390,167 - -1.3
1,390,182 - -0.0
1,390,202 - -0.3
1,390,214 + -1.2
1,390,216 - +2.2
1,390,240 + -0.9
1,390,243 + +0.4
1,390,250 + -1.8
1,390,297 + +0.2
1,390,324 - -0.0
1,390,327 + -0.2
1,390,327 + -0.6
1,390,357 + +0.2
1,390,360 - +0.9
1,390,369 - -0.8
1,390,370 + -2.1
1,390,375 + -0.4
1,390,376 - -1.2
1,390,378 - +0.5
1,390,390 - -0.1
1,390,390 - +1.0
1,390,390 - +0.1
1,390,390 - -0.5
1,390,390 - +1.0
1,390,390 - -0.5
1,390,419 + +0.2
1,390,474 + -0.1
1,390,492 - -1.9
1,390,503 - -0.8
1,390,517 - -0.5
1,390,519 - -1.0
1,390,519 - +0.3
1,390,519 - +1.7
1,390,543 - -1.9
1,390,617 - -1.8
1,390,642 - -1.4
1,390,650 - -1.7
1,390,663 - -0.8
1,390,663 + +0.5
1,390,704 - +0.2
1,390,723 - +1.1
1,390,740 - -0.7
1,390,755 - +1.6
1,390,763 - -1.3
1,390,769 - +2.3
1,390,770 - +3.1
1,390,775 - -0.0
1,390,783 - +0.7
1,390,783 - -0.4
1,390,783 - +0.1
1,390,786 - -0.8
1,390,796 - +0.6

Or see this region's nucleotide sequence