Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7565

Experiment: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15932 and 15933 are separated by 423 nucleotides15933 and 15934 are separated by 47 nucleotides mRNA_7564: 15932 - K03138 TFIIF1, GTF2F1, TFG1 transcription initiation factor TFIIF subunit alpha, at 577,074 to 579,231 15932 mRNA_7565: 15933 - KOG0029 Amine oxidase, at 579,655 to 580,246 15933 mRNA_7566: 15934 - K12347 SLC11A, NRAMP natural resistance-associated macrophage protein, at 580,294 to 582,534 15934

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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580,272 + -1.3

Or see this region's nucleotide sequence