Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7706

Experiment: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_7706: 16074 - Hypothetical Protein, at 892,554 to 894,176 16074

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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891,564 + +0.7
891,570 + +0.7
891,610 - +0.3
891,636 + -1.4
891,703 + -0.4
891,715 - -0.1
891,721 + +1.5
891,723 + +0.0
891,739 - -0.0
891,740 + -0.9
891,745 - -0.1
891,759 + +0.5
891,761 - +0.9
891,780 - +0.9
891,791 - -0.8
891,849 - -1.1
891,853 - -0.5
891,864 + -0.5
891,873 - +0.9
891,877 + -0.9
891,882 - -0.3
891,931 - +0.1
891,931 - -0.2
891,933 - +0.0
891,934 + -0.5
891,937 - +0.6
891,941 - -0.2
891,956 - -1.4
891,964 + -1.4
891,968 + +0.6
891,973 - -0.7
891,975 + +0.3
891,982 - -1.1
891,997 + +0.8
892,014 - +0.5
892,104 - -1.4
892,105 - -0.0
892,114 + -0.6
892,133 - +0.6
892,242 + -0.1
892,261 + +0.0
892,268 - -0.3
892,296 + +0.3
892,401 + +0.1
892,437 + +0.5
892,463 + -0.4
892,463 + +0.7
892,503 - +1.3
892,515 + -2.2
892,534 - +0.7
892,541 + +0.6
892,554 - +1.2
892,556 + +0.5
892,709 - -1.6
892,721 + 16074 mRNA_7706 0.10 -0.4
892,843 + 16074 mRNA_7706 0.18 -0.4
893,088 - 16074 mRNA_7706 0.33 -0.6
893,089 + 16074 mRNA_7706 0.33 -1.1
893,419 - 16074 mRNA_7706 0.53 +0.8
893,738 + 16074 mRNA_7706 0.73 -1.2
893,749 + 16074 mRNA_7706 0.74 -0.1
894,429 + -1.4
894,429 - +0.2
894,436 - -0.4
894,464 + +0.1
894,590 + -0.3
894,605 - -0.2
894,607 - +0.7
894,608 + -0.2
894,737 + -0.3
894,743 - +0.6
894,931 + +0.2
894,940 + +0.6
895,059 + +0.2

Or see this region's nucleotide sequence