Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7882

Experiment: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16250 and 16251 are separated by 661 nucleotides mRNA_7882: 16250 - HMMPfam-Protein of unknown function (DUF4243)-PF14027, at 1,289,991 to 1,293,240 16250 mRNA_7883: 16251 - Hypothetical Protein, at 1,293,902 to 1,295,426 16251

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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1,289,663 - -0.4
1,289,805 + +1.4
1,289,809 + +0.5
1,289,811 - -1.2
1,289,815 + +0.9
1,289,819 + -2.2
1,289,952 - +0.7
1,290,092 - -0.1
1,290,096 + -0.6
1,290,102 + -0.7
1,290,284 + +0.9
1,290,412 - 16250 mRNA_7882 0.13 +0.4
1,291,241 - 16250 mRNA_7882 0.38 +0.6
1,291,305 + 16250 mRNA_7882 0.40 -2.1
1,291,713 - 16250 mRNA_7882 0.53 -0.5
1,291,747 - 16250 mRNA_7882 0.54 +0.5
1,291,843 - 16250 mRNA_7882 0.57 -0.1
1,292,178 + 16250 mRNA_7882 0.67 +1.2
1,292,281 - 16250 mRNA_7882 0.70 +1.1
1,292,569 - 16250 mRNA_7882 0.79 -1.1
1,292,678 + 16250 mRNA_7882 0.83 -0.0
1,293,319 + -2.0
1,293,373 + -1.6
1,293,453 - +0.8
1,293,474 + +0.4
1,293,507 + +0.4
1,293,561 - -2.5
1,293,580 + -1.9
1,293,594 + -0.3
1,293,597 - +0.7
1,293,632 - -1.7
1,293,637 - +0.6
1,293,641 + +2.5
1,293,645 + +0.5
1,293,649 + +0.1
1,293,652 + -1.3
1,293,659 - -1.2
1,293,666 + +1.4
1,293,669 + -0.3
1,293,676 + -0.2
1,293,677 - +1.6
1,293,680 + -0.3
1,293,682 - +0.9
1,293,696 - -0.5
1,293,708 + +1.5
1,293,823 + +1.6
1,293,824 - +0.4
1,293,825 - +1.2
1,293,839 - +1.9
1,293,843 - +0.1
1,293,852 + +0.2
1,293,857 + +1.2
1,293,858 - -0.5
1,293,871 + -0.4
1,293,873 - +0.1
1,293,973 - +0.1
1,294,122 + 16251 mRNA_7883 0.14 +0.5
1,294,151 + 16251 mRNA_7883 0.16 -1.9
1,294,168 + 16251 mRNA_7883 0.17 +0.2
1,294,182 + 16251 mRNA_7883 0.18 +1.4

Or see this region's nucleotide sequence