Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8141

Experiment: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16508 and 16509 are separated by 523 nucleotides16509 and 16510 are separated by 526 nucleotides mRNA_8140: 16508 - Hypothetical Protein, at 510,468 to 511,367 16508 mRNA_8141: 16509 - Hypothetical Protein, at 511,891 to 512,782 16509 mRNA_8142: 16510 - K06910 K06910 uncharacterized protein, at 513,309 to 514,169 16510

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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510,985 + 16508 mRNA_8140 0.57 -0.6
511,114 - 16508 mRNA_8140 0.72 +0.5
511,183 + 16508 mRNA_8140 0.79 +0.2
511,306 - -0.4
511,313 + +1.4
511,318 - -0.2
511,934 + +0.1
512,073 + 16509 mRNA_8141 0.20 +0.2
512,361 + 16509 mRNA_8141 0.53 -0.2
512,378 + 16509 mRNA_8141 0.55 +0.8
512,529 + 16509 mRNA_8141 0.72 -0.6
512,827 + -1.0
513,091 + -0.5
513,125 + -1.1
513,140 + -0.3
513,198 - +1.0
513,541 + 16510 mRNA_8142 0.27 +2.0

Or see this region's nucleotide sequence