Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8295

Experiment: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16662 and 16663 are separated by 444 nucleotides16663 and 16664 are separated by 417 nucleotides mRNA_8294: 16662 - Hypothetical Protein, at 869,009 to 869,206 16662 mRNA_8295: 16663 - Hypothetical Protein, at 869,651 to 870,841 16663 mRNA_8296: 16664 - K19951 TBC1D8_9 TBC1 domain family member 8/9, at 871,259 to 875,299 16664

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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868,662 + -0.1
868,687 - -0.7
868,711 - +0.4
868,840 - -0.5
868,972 + +1.2
869,045 + 16662 mRNA_8294 0.18 +0.1
869,061 - 16662 mRNA_8294 0.26 -1.7
869,117 - 16662 mRNA_8294 0.55 -0.3
869,127 + 16662 mRNA_8294 0.60 -0.1
869,166 + 16662 mRNA_8294 0.79 -0.5
869,175 - 16662 mRNA_8294 0.84 +1.1
869,178 + 16662 mRNA_8294 0.85 +0.3
869,195 + -0.5
869,218 - -0.0
869,233 + -1.5
869,261 + -1.0
869,262 - -1.1
869,270 + +0.4
869,273 - +0.3
869,273 - +0.5
869,276 - -2.5
869,278 - +1.1
869,288 + +0.1
869,290 + +0.1
869,292 - -1.4
869,302 + -0.4
869,303 + +0.6
869,345 - -1.1
869,359 - +1.0
869,371 + +0.4
869,383 - +2.4
869,396 - -2.5
869,407 + -0.5
869,409 - -0.5
869,425 + +1.4
869,559 - +0.6
869,876 + 16663 mRNA_8295 0.19 +0.2
870,153 - 16663 mRNA_8295 0.42 +0.8
870,579 - 16663 mRNA_8295 0.78 -0.4
870,601 + 16663 mRNA_8295 0.80 +0.0
870,606 - 16663 mRNA_8295 0.80 -0.1
871,016 - +1.2
871,200 - +0.3
871,201 - -0.3
871,209 - +0.0
871,354 + -1.0
871,682 + 16664 mRNA_8296 0.10 -2.4

Or see this region's nucleotide sequence