Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_506

Experiment: Sorted No BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 8874 and 8875 are separated by 794 nucleotides mRNA_506: 8874 - K08793 STK32, YANK serine/threonine kinase 32, at 1,203,196 to 1,205,360 8874 mRNA_507: 8875 - K19347 SUN1_2 SUN domain-containing protein 1/2, at 1,206,155 to 1,210,007 8875

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
remove
1,202,263 - +1.6
1,202,271 - -0.5
1,202,367 + +0.3
1,202,550 + +0.4
1,202,564 + -0.2
1,202,682 - -0.0
1,202,705 + +0.7
1,202,713 + -1.2
1,202,718 + -0.7
1,202,853 - +0.3
1,202,854 + +0.7
1,202,854 + +0.2
1,202,877 + +0.5
1,202,901 - +0.4
1,202,977 - -1.1
1,203,002 + +0.0
1,203,044 + -0.4
1,203,053 + -0.2
1,203,173 + -0.2
1,203,185 + +0.9
1,203,189 + +0.5
1,203,303 + -1.4
1,203,324 + -0.5
1,203,339 + -1.3
1,203,473 + 8874 mRNA_506 0.13 -0.9
1,203,627 + 8874 mRNA_506 0.20 -1.7
1,203,742 + 8874 mRNA_506 0.25 -1.5
1,204,177 - 8874 mRNA_506 0.45 -1.6
1,204,440 - 8874 mRNA_506 0.57 -0.9
1,204,635 - 8874 mRNA_506 0.66 +0.3
1,204,803 - 8874 mRNA_506 0.74 +1.5
1,204,888 + 8874 mRNA_506 0.78 -0.8
1,205,137 - 8874 mRNA_506 0.90 -0.8
1,205,497 - -0.7
1,205,797 - +0.0

Or see this region's nucleotide sequence