Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1083

Experiment: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9450 and 9451 are separated by 559 nucleotides mRNA_1082: 9450 - Hypothetical Protein, at 368,387 to 368,641 9450 mRNA_1083: 9451 - Hypothetical Protein, at 369,201 to 370,313 9451

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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368,302 - +1.0
368,310 - -0.2
368,331 + -0.5
368,438 - 9450 mRNA_1082 0.20 +0.1
368,439 - 9450 mRNA_1082 0.20 +0.1
368,472 - 9450 mRNA_1082 0.33 -0.8
368,473 - 9450 mRNA_1082 0.34 +1.5
368,505 - 9450 mRNA_1082 0.46 -0.0
368,568 + 9450 mRNA_1082 0.71 -0.2
368,581 - 9450 mRNA_1082 0.76 -0.8
368,608 - 9450 mRNA_1082 0.87 -0.0
368,611 - 9450 mRNA_1082 0.88 +0.1
368,613 + 9450 mRNA_1082 0.89 +0.8
368,649 + -1.1
368,770 + -0.5
368,771 + +0.4
369,221 - -0.9
369,237 + +0.7
369,341 - 9451 mRNA_1083 0.13 -1.1
369,753 - 9451 mRNA_1083 0.50 -2.2
370,476 - -1.3
370,480 + -1.9
370,502 + +2.2
370,621 + +0.1
370,623 + +0.4
370,624 + +1.9
370,638 + -0.1
370,772 - +1.0
370,777 + -1.8
370,794 - +0.1
370,802 + +0.6
370,946 + -0.0
371,219 - -0.5
371,228 + -2.0
371,244 + -0.0

Or see this region's nucleotide sequence