Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1250

Experiment: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9618 and 9619 are separated by 264 nucleotides mRNA_1250: 9618 - Hypothetical Protein, at 754,124 to 756,266 9618 mRNA_1251: 9619 - HMMPfam-Protein of unknown function (DUF2611)-PF11022, at 756,531 to 757,355 9619

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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753,126 + -0.5
753,138 - -1.2
753,138 - +0.2
753,145 - -0.0
753,150 - -0.6
753,264 + -0.7
753,269 + -0.5
753,393 + +0.0
753,406 - -0.6
753,416 + +0.3
753,426 + +0.5
753,438 + -0.3
753,450 + +1.5
753,719 - +1.1
753,846 - -0.8
753,866 + -0.0
754,012 - -0.9
754,018 + -2.9
754,100 - +0.2
754,167 + -0.1
754,303 - -0.2
754,333 + -0.2
755,012 - 9618 mRNA_1250 0.41 +0.1
755,913 - 9618 mRNA_1250 0.83 -1.0
756,465 - +0.6
756,469 + +0.1
756,472 + +0.6
756,482 - +1.2
756,486 - -0.1
756,487 + +1.4
756,488 - +0.6
756,647 + 9619 mRNA_1251 0.14 -0.7
756,671 + 9619 mRNA_1251 0.17 +0.7
756,786 + 9619 mRNA_1251 0.31 +0.1
756,797 + 9619 mRNA_1251 0.32 +0.0
757,182 + 9619 mRNA_1251 0.79 +1.2
757,183 - 9619 mRNA_1251 0.79 +1.1

Or see this region's nucleotide sequence