Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1362

Experiment: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9729 and 9730 are separated by 935 nucleotides mRNA_1361: 9729 - Hypothetical Protein, at 90,771 to 91,579 9729 mRNA_1362: 9730 - K00507 SCD, desC stearoyl-CoA desaturase (Delta-9 desaturase), at 92,515 to 94,818 9730

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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91,554 - +0.1
91,689 + -0.5
91,699 + -1.8
91,714 + +2.0
91,818 - -0.3
91,935 - -1.2
91,935 - -2.3
91,938 + +0.5
91,959 - +0.6
91,978 - +2.2
92,007 + +1.0
92,008 + +1.1
92,008 + +0.2
92,010 + -0.8
92,027 + -0.0
92,058 - +1.0
92,090 - -0.2
92,094 + +1.6
92,105 - -1.3
92,128 + -0.2
92,131 - -0.4
92,142 - +0.1
92,143 + -0.3
92,155 + -0.2
92,162 - +0.8
92,176 - +0.5
92,206 + +1.4
92,212 + -0.9
92,212 - -0.3
92,221 - +0.5
92,255 - +0.1
92,270 - -0.4
92,272 - +0.2
92,282 - -0.2
92,285 + +0.6
92,291 + +2.4
92,295 - -0.3
92,302 - -1.3
92,308 + -0.1
94,918 + -0.2
95,018 - -1.6
95,109 + -0.6
95,115 + +0.4
95,134 - +0.2
95,170 + -1.2
95,437 - -0.2
95,442 - +0.2
95,492 + -1.4

Or see this region's nucleotide sequence