Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1759

Experiment: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 10127 and 10128 are separated by 429 nucleotides mRNA_1759: 10127 - K13345 PEX12, PAF3 peroxin-12, at 132,751 to 134,282 10127 mRNA_1760: 10128 - KOG0940 Ubiquitin protein ligase RSP5/NEDD4, at 134,712 to 138,303 10128

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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131,830 - -1.5
131,833 - -0.8
131,859 + +0.5
131,987 + +0.4
131,998 - +1.7
132,026 + -1.9
132,157 - -2.2
132,305 + +0.7
132,731 + -1.7
134,295 - -1.1
134,307 + +0.6
134,324 + -0.4
134,613 - +0.1
134,614 + +1.2

Or see this region's nucleotide sequence