Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1966

Experiment: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 10334 and 10335 are separated by 303 nucleotides mRNA_1966: 10334 - K09522 DNAJC2 DnaJ homolog subfamily C member 2, at 628,186 to 629,960 10334 mRNA_1967: 10335 - BLAST proteophosphoglycan 5 [Moniliophthora roreri MCA ..., at 630,264 to 633,467 10335

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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627,654 + +0.3
627,670 + -1.4
627,670 + -0.3
627,672 + +0.0
627,809 + +0.1
627,813 + +0.8
627,813 - -1.3
627,819 - -0.2
627,823 - +1.3
629,991 - +0.2
630,281 + -1.5
630,428 - -0.2
630,568 - -1.7
630,852 - 10335 mRNA_1967 0.18 -0.2

Or see this region's nucleotide sequence