Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2032

Experiment: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 10400 and 10401 are separated by 674 nucleotides mRNA_2032: 10400 - KOG1441 Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter, at 794,820 to 796,212 10400 mRNA_2033: 10401 - K09595 HM13 minor histocompatibility antigen H13, at 796,887 to 798,543 10401

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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794,153 + -0.8
794,890 - -3.4
794,892 + -3.7
795,020 + 10400 mRNA_2032 0.14 -3.7
795,530 + 10400 mRNA_2032 0.51 -0.6
795,875 + 10400 mRNA_2032 0.76 -1.4
795,918 + 10400 mRNA_2032 0.79 -0.6
796,025 + 10400 mRNA_2032 0.87 -4.6
796,091 - -3.3
796,206 - -2.8
796,370 - -2.6
796,529 + +0.4
796,670 + +0.2
796,694 - -1.5
797,120 + 10401 mRNA_2033 0.14 -2.8

Or see this region's nucleotide sequence