Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2159

Experiment: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 10526 and 10527 are separated by 357 nucleotides mRNA_2158: 10526 - K14550 UTP10, HEATR1 U3 small nucleolar RNA-associated protein 10, at 209,112 to 215,821 10526 mRNA_2159: 10527 - K03263 EIF5A translation initiation factor 5A, at 216,179 to 217,701 10527

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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215,747 - -0.0
215,890 + +1.7
215,897 - +1.3
215,909 + -0.7
215,909 + -0.4
216,089 + +0.4
216,101 - -1.5
216,101 + +1.1
216,107 - -1.4
216,108 - +0.2
216,117 - +0.1
216,119 + -1.1
216,122 + +0.7
216,123 + -0.1
216,127 + +1.6
217,682 - -1.6
218,307 + -0.9

Or see this region's nucleotide sequence