Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2320

Experiment: Sorted Low BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_2320: 10688 - HMMPfam-Carboxylesterase family-PF00135,SUPERFAMILY--SSF53474, at 599,987 to 602,471 10688

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
remove
599,148 - +0.7
599,154 - +2.1
599,154 + -1.2
599,178 - -0.3
599,316 - -0.1
599,317 + -0.1
599,321 - -1.2
599,463 - -0.5
599,868 - +0.1
599,890 + -2.9
599,902 - +0.1
599,905 + -1.2
599,909 + +1.2
600,029 + -0.5
600,064 - +0.0
600,482 - 10688 mRNA_2320 0.20 -1.3
601,187 + 10688 mRNA_2320 0.48 +0.1
601,342 - 10688 mRNA_2320 0.55 +0.4
601,409 + 10688 mRNA_2320 0.57 -1.6
601,636 - 10688 mRNA_2320 0.66 +0.9
601,639 + 10688 mRNA_2320 0.66 +1.1
602,175 - 10688 mRNA_2320 0.88 +0.4
602,188 + 10688 mRNA_2320 0.89 +0.6
602,209 - 10688 mRNA_2320 0.89 -0.8
602,218 + 10688 mRNA_2320 0.90 -1.5
602,497 + -0.9
602,665 + -2.3
602,674 - +2.0
602,700 - -0.8
602,705 + -1.6
602,861 + -1.6
603,251 - +0.2

Or see this region's nucleotide sequence