Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2675

Experiment: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_2675: 11043 - HMMPfam-Putative adipose-regulatory protein (Seipin)-PF06775, at 743,974 to 745,972 11043

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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743,026 + -0.8
743,045 - +1.1
743,048 + -0.3
743,067 + -0.7
743,223 + -1.4
743,317 - +0.4
743,354 + -1.3
743,365 - -1.4
743,762 - -2.5
743,762 - -0.1
743,798 + +0.4
743,798 - +0.8
743,806 - +1.1
743,840 + -2.8
743,846 + -0.3
743,950 - +0.5
744,125 - +2.3
744,206 - 11043 mRNA_2675 0.12 +1.8
744,231 - 11043 mRNA_2675 0.13 +2.3
744,231 - 11043 mRNA_2675 0.13 +4.3
744,247 - 11043 mRNA_2675 0.14 +2.2
744,256 + 11043 mRNA_2675 0.14 +1.2
744,280 - 11043 mRNA_2675 0.15 +2.7
744,362 + 11043 mRNA_2675 0.19 +3.6
744,365 + 11043 mRNA_2675 0.20 +3.7
744,390 + 11043 mRNA_2675 0.21 +3.2
744,555 - 11043 mRNA_2675 0.29 +4.3
744,587 + 11043 mRNA_2675 0.31 +2.7
744,676 + 11043 mRNA_2675 0.35 +3.4
745,117 + 11043 mRNA_2675 0.57 +1.7
745,492 - 11043 mRNA_2675 0.76 +0.7
745,696 - 11043 mRNA_2675 0.86 -0.4
745,952 - +2.3
745,954 - +2.7
745,954 - -1.5
745,963 + +0.8
746,095 + -0.3
746,104 + -0.0
746,110 - +1.7
746,124 + -0.9
746,151 + -0.0
746,167 + -1.2
746,170 - +0.3
746,248 - +0.2
746,257 + -0.9
746,264 + -0.6
746,276 + -0.0
746,276 - -0.2
746,277 + -1.1
746,278 - -0.2
746,288 - -0.2
746,314 + -0.4

Or see this region's nucleotide sequence