Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2737

Experiment: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 11104 and 11105 are separated by 280 nucleotides mRNA_2736: 11104 - K11093 SNRP70 U1 small nuclear ribonucleoprotein 70kDa, at 103,067 to 104,847 11104 mRNA_2737: 11105 - K09584 PDIA6, TXNDC7 protein disulfide-isomerase A6, at 105,128 to 106,332 11105

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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104,965 + -2.7
105,222 - -2.4
105,512 + 11105 mRNA_2737 0.32 -0.9
105,613 - 11105 mRNA_2737 0.40 -1.9
105,820 - 11105 mRNA_2737 0.57 -0.2
106,231 - +0.6
106,364 - -1.1
106,376 + +2.3
106,546 - -0.1
106,645 + +0.7
106,669 - -2.6
106,844 - -1.6
106,862 + -1.0
106,986 + +0.2
107,149 - +0.0
107,323 + +0.2

Or see this region's nucleotide sequence