Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2895

Experiment: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 11262 and 11263 are separated by 215 nucleotides11263 and 11264 are separated by 558 nucleotides mRNA_2894: 11262 - SUPERFAMILY--SSF52047, at 474,983 to 476,277 11262 mRNA_2895: 11263 - KOG3043 Predicted hydrolase related to dienelactone hydrolase, at 476,493 to 477,623 11263 mRNA_2896: 11264 - KOG3043 Predicted hydrolase related to dienelactone hydrolase, at 478,182 to 479,265 11264

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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475,645 - 11262 mRNA_2894 0.51 -0.2
475,847 - 11262 mRNA_2894 0.67 -1.4
475,972 + 11262 mRNA_2894 0.76 +0.7
476,247 + +0.1
476,277 + +1.6
476,348 + -3.0
476,381 - -1.2
476,393 + -0.7
476,591 + +0.5
476,606 + 11263 mRNA_2895 0.10 -0.3
476,717 + 11263 mRNA_2895 0.20 -0.2
476,733 + 11263 mRNA_2895 0.21 +1.8
476,739 - 11263 mRNA_2895 0.22 -1.8
476,742 - 11263 mRNA_2895 0.22 +1.5
476,876 - 11263 mRNA_2895 0.34 -1.6
476,890 + 11263 mRNA_2895 0.35 -0.0
476,991 + 11263 mRNA_2895 0.44 -0.5
477,035 - 11263 mRNA_2895 0.48 -0.7
477,269 + 11263 mRNA_2895 0.69 +0.4
477,666 + -1.2
477,770 - -0.9
477,896 + -0.1
477,907 + +0.5
478,340 - 11264 mRNA_2896 0.15 +0.3

Or see this region's nucleotide sequence