Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2900

Experiment: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 11268 and 11269 are separated by 671 nucleotides mRNA_2900: 11268 - BLAST pyridoxamine-phosphate oxidase [Moniliophthora ro..., at 493,675 to 494,245 11268 mRNA_2901: 11269 - KOG1289 Amino acid transporters, at 494,917 to 497,480 11269

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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492,686 - -0.2
492,716 - +0.3
492,778 + -0.6
492,872 - -0.1
492,889 + -0.2
493,340 - -1.2
493,379 - +1.1
493,640 - +0.2
494,113 + 11268 mRNA_2900 0.77 +0.1
494,367 + -0.9
494,433 + -1.3
494,489 + -1.9
494,513 + -0.3
494,547 + -0.7
494,604 - -0.1
494,604 - -1.8
494,635 - +0.1
494,646 + -0.2
494,651 + -2.1
494,655 + -0.1
494,655 - +0.2
494,656 + -0.7
494,684 + +0.1
494,684 - -0.4
494,687 - -0.6
494,692 - -2.2
494,699 - +0.3
494,700 - +0.2
494,701 + -0.3
494,717 + -1.1
494,722 - -1.7
494,816 + +0.6
494,818 - -1.3
494,837 - -1.2
494,851 - +0.8
494,861 + +0.2
494,874 + -2.7
494,927 - -1.1
494,988 - -0.9
495,011 - +0.2
495,016 - +1.3
495,052 + -0.8
495,129 - -0.3
495,162 - -0.5

Or see this region's nucleotide sequence