Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3836

Experiment: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_3836: 12204 - Hypothetical Protein, at 700,851 to 701,786 12204

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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699,969 - +0.8
699,991 + -0.1
700,118 - +1.4
700,143 - +1.8
700,283 - +0.0
700,426 - +0.0
700,428 - -1.4
700,472 - +2.8
700,524 - -1.3
700,530 - +1.3
700,538 + -0.9
700,553 - -2.4
700,553 + +1.1
700,607 + +0.5
700,621 + +0.0
700,630 - -2.2
700,681 - -0.3
700,779 + +0.2
700,933 - +0.7
700,952 + 12204 mRNA_3836 0.11 -1.2
701,345 - 12204 mRNA_3836 0.53 -1.6
701,396 - 12204 mRNA_3836 0.58 +0.5
701,640 + 12204 mRNA_3836 0.84 +0.6
701,668 - 12204 mRNA_3836 0.87 -0.2
701,774 + +0.8
701,782 + -0.8
701,785 - -0.4
701,950 + -0.0
702,107 - -1.3
702,222 - +0.8
702,225 - -0.0
702,243 - +0.9
702,361 + +0.2
702,363 + -0.6
702,364 + -0.7
702,364 + -2.1
702,397 + -1.1
702,399 - +0.2
702,404 + +0.1
702,406 - +0.4
702,428 + -2.6
702,475 - -0.2
702,490 - +1.6
702,490 - -0.4
702,493 + -1.5
702,581 - -0.8
702,689 + -0.9

Or see this region's nucleotide sequence