Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4077

Experiment: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 12444 and 12445 are separated by 722 nucleotides12445 and 12446 are separated by 930 nucleotides mRNA_4076: 12444 - K12486 SMAP stromal membrane-associated protein, at 1,298,752 to 1,301,700 12444 mRNA_4077: 12445 - K07101 K07101 uncharacterized protein, at 1,302,423 to 1,303,629 12445 mRNA_4078: 12446 - K15113 SLC25A28_37, MFRN solute carrier family 25 (mitochondrial iron transporter), member 28/37, at 1,304,560 to 1,305,720 12446

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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1,301,454 - +0.3
1,301,461 + +0.0
1,301,601 - -0.5
1,301,757 - -1.2
1,301,765 + -1.2
1,301,770 - -1.2
1,301,772 - +0.4
1,301,773 + -0.6
1,301,903 + +0.0
1,301,903 + -0.1
1,301,909 + -1.9
1,302,042 + +1.1
1,302,209 - +0.2
1,302,614 - 12445 mRNA_4077 0.16 +0.6
1,302,620 - 12445 mRNA_4077 0.16 -1.8
1,302,621 - 12445 mRNA_4077 0.16 -0.5
1,302,633 + 12445 mRNA_4077 0.17 +0.8
1,302,929 - 12445 mRNA_4077 0.42 -2.1
1,303,040 - 12445 mRNA_4077 0.51 +1.8
1,303,071 + 12445 mRNA_4077 0.54 -1.2
1,303,178 - 12445 mRNA_4077 0.63 -1.2
1,303,377 + 12445 mRNA_4077 0.79 -0.3
1,303,465 - 12445 mRNA_4077 0.86 +0.8
1,303,660 + +0.3
1,303,795 - -0.3
1,303,946 + -2.4
1,304,254 - -2.8
1,304,256 + -0.0
1,304,398 + -1.0
1,304,402 + +0.5
1,304,402 + -2.5
1,304,406 + +0.6

Or see this region's nucleotide sequence