Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4962

Experiment: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 13330 and 13331 are separated by 626 nucleotides mRNA_4962: 13330 - Hypothetical Protein, at 1,416,081 to 1,416,742 13330 mRNA_4963: 13331 - Hypothetical Protein, at 1,417,369 to 1,418,489 13331

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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1,416,083 + -1.6
1,416,394 + 13330 mRNA_4962 0.47 -0.3
1,416,409 + 13330 mRNA_4962 0.50 -0.6
1,416,539 + 13330 mRNA_4962 0.69 -0.9
1,416,627 - 13330 mRNA_4962 0.82 +0.1
1,416,686 + +1.7
1,416,788 + +0.2
1,416,897 + +0.1
1,416,900 - +0.1
1,416,951 + +0.2
1,417,063 - -1.5
1,417,213 + -2.0
1,417,266 - -0.1
1,417,529 - 13331 mRNA_4963 0.14 +0.7
1,417,539 + 13331 mRNA_4963 0.15 +0.1
1,417,654 - 13331 mRNA_4963 0.25 -1.5

Or see this region's nucleotide sequence