Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5088

Experiment: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_5088: 13456 - BLAST cytochrome P450 [Coprinopsis cinerea okayama7#130], at 1,722,250 to 1,723,721 13456

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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1,721,410 + -0.7
1,721,428 - +0.9
1,721,846 + -0.3
1,722,153 - +0.1
1,722,423 - 13456 mRNA_5088 0.12 +0.4
1,722,594 + 13456 mRNA_5088 0.23 +0.0
1,722,933 + 13456 mRNA_5088 0.46 -1.2
1,723,308 + 13456 mRNA_5088 0.72 +0.2
1,723,416 - 13456 mRNA_5088 0.79 -2.6
1,723,554 - 13456 mRNA_5088 0.89 +0.4
1,723,915 - -0.9
1,724,171 - +0.3
1,724,199 + +0.8
1,724,199 - -0.5
1,724,207 + -1.3
1,724,490 - +0.3
1,724,495 - -1.2
1,724,575 + -1.8

Or see this region's nucleotide sequence