Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5377

Experiment: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_5377: 13745 - Hypothetical Protein, at 587,217 to 590,101 13745

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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586,763 + -0.6
586,764 + +0.4
586,782 - -1.6
586,788 - -1.2
586,789 - -1.2
586,890 + +1.6
587,061 + -3.7
587,074 + -1.5
587,428 + +0.1
587,628 + 13745 mRNA_5377 0.14 -2.1
587,631 + 13745 mRNA_5377 0.14 -1.0
587,812 - 13745 mRNA_5377 0.21 +0.3
587,958 - 13745 mRNA_5377 0.26 +1.3
588,185 - 13745 mRNA_5377 0.34 -1.0
588,374 - 13745 mRNA_5377 0.40 -1.2
588,380 + 13745 mRNA_5377 0.40 -0.3
588,509 + 13745 mRNA_5377 0.45 +1.0
588,522 - 13745 mRNA_5377 0.45 +0.2
588,721 + 13745 mRNA_5377 0.52 -2.4
588,747 - 13745 mRNA_5377 0.53 +0.5
588,844 - 13745 mRNA_5377 0.56 +0.1
588,853 - 13745 mRNA_5377 0.57 -0.2
588,865 + 13745 mRNA_5377 0.57 -0.5
589,554 + 13745 mRNA_5377 0.81 -1.5
589,596 - 13745 mRNA_5377 0.82 +0.6
589,632 - 13745 mRNA_5377 0.84 +0.5
590,035 + -2.7
590,199 - -0.7
590,325 + -1.0
590,363 + +1.4
590,411 - -0.8
590,427 - +0.1
590,428 + +1.4
590,430 + -1.5
590,442 + -0.6
590,459 - +0.3
590,464 - +0.8
590,470 - +0.3
590,474 - -0.4
590,478 - -1.1
590,492 + -0.9
590,650 - -0.7
590,762 + +1.8
590,994 + -1.0
591,009 + -0.6
591,019 - -0.1

Or see this region's nucleotide sequence