Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5644

Experiment: Sorted Low BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14012 and 14013 are separated by 269 nucleotides mRNA_5644: 14012 - Hypothetical Protein, at 583,736 to 584,443 14012 mRNA_5645: 14013 - BLAST putative alkaline phosphatase [Phaeomoniella chlamydo..., at 584,713 to 586,254 14013

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
remove
582,871 + +0.5
583,406 - +0.4
583,829 - 14012 mRNA_5644 0.13 +1.2
583,956 - 14012 mRNA_5644 0.31 -0.5
584,058 + 14012 mRNA_5644 0.45 +0.9
584,472 - -1.3
584,666 + -0.8
584,784 - -0.0
584,975 - 14013 mRNA_5645 0.17 -0.1
585,103 + 14013 mRNA_5645 0.25 +0.0
585,353 + 14013 mRNA_5645 0.42 -0.6

Or see this region's nucleotide sequence