Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5769

Experiment: Sorted Low BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14137 and 14138 are separated by 476 nucleotides mRNA_5769: 14137 - Hypothetical Protein, at 902,157 to 903,800 14137 mRNA_5770: 14138 - K15171 SUPT4H1, SPT4 transcription elongation factor SPT4, at 904,277 to 904,949 14138

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
remove
901,353 + +0.7
901,417 + +1.0
901,456 + +0.0
902,028 - -1.6
902,188 - +1.4
902,188 - +1.4
902,361 - 14137 mRNA_5769 0.12 -0.5
902,495 + 14137 mRNA_5769 0.21 +0.3
902,615 + 14137 mRNA_5769 0.28 +1.1
902,644 + 14137 mRNA_5769 0.30 -2.1
903,077 - 14137 mRNA_5769 0.56 +0.4
903,200 - 14137 mRNA_5769 0.63 +0.7
903,234 + 14137 mRNA_5769 0.66 +1.0
903,783 - -1.4
903,802 - +1.2
903,927 + +0.9
903,949 + -0.1
903,983 + -0.1
904,098 + +0.5
904,100 - +0.0
904,209 - +0.8
904,233 + -0.6
904,253 + -1.6
904,257 - +0.9

Or see this region's nucleotide sequence