Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5890

Experiment: Sorted Low BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14257 and 14258 are separated by 344 nucleotides mRNA_5889: 14257 - K02977 RP-S27Ae, RPS27A small subunit ribosomal protein S27Ae, at 1,176,475 to 1,177,214 14257 mRNA_5890: 14258 - K01876 DARS, aspS aspartyl-tRNA synthetase, at 1,177,559 to 1,180,094 14258

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
remove
1,176,974 + 14257 mRNA_5889 0.67 -1.6
1,177,250 - +0.2
1,177,256 + -0.1
1,177,315 - -3.6
1,177,404 - -1.1
1,180,138 + -0.5
1,180,167 + -0.0
1,180,173 + -1.1
1,180,273 - -0.2
1,180,326 - +0.6
1,180,461 - -2.1
1,180,492 - -0.9
1,180,621 + -2.5
1,180,760 - -1.2
1,180,771 - +0.3
1,180,772 + -2.2
1,180,775 + -0.0
1,180,912 + -1.8
1,181,040 - -1.6
1,181,047 - -2.3

Or see this region's nucleotide sequence