Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5949

Experiment: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14316 and 14317 are separated by 869 nucleotides mRNA_5948: 14316 - HMMPfam-Zinc finger C-x8-C-x5-C-x3-H type-PF14608,ProSiteProfiles-Zinc finger C3H1-type profile.-PS50103,SMART-zinc finger-SM00356, at 1,303,532 to 1,306,602 14316 mRNA_5949: 14317 - K01046 E3.1.1.3 triacylglycerol lipase, at 1,307,472 to 1,308,620 14317

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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1,306,488 - +1.1
1,306,505 - -1.9
1,306,645 - -0.6
1,306,649 - +1.0
1,306,670 + -1.6
1,306,869 + -0.2
1,306,979 + +0.4
1,307,111 - -1.0
1,307,125 - +0.9
1,307,129 + -1.4
1,307,142 + +0.2
1,307,272 - +0.2
1,307,277 - +0.4
1,307,694 - 14317 mRNA_5949 0.19 +0.0
1,307,707 + 14317 mRNA_5949 0.20 -0.3
1,307,972 + 14317 mRNA_5949 0.44 -0.8
1,308,548 + +0.4
1,308,672 - -0.1
1,308,716 + -2.0
1,308,730 - -0.3
1,309,452 + -0.5
1,309,513 + -1.2
1,309,607 + +0.3
1,309,607 + -1.3

Or see this region's nucleotide sequence