Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6051

Experiment: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14418 and 14419 are separated by 360 nucleotides14419 and 14420 are separated by 199 nucleotides mRNA_6050: 14418 - K03942 NDUFV1 NADH dehydrogenase (ubiquinone) flavoprotein 1, at 1,521,571 to 1,523,726 14418 mRNA_6051: 14419 - Hypothetical Protein, at 1,524,087 to 1,525,475 14419 mRNA_6052: 14420 - Hypothetical Protein, at 1,525,675 to 1,528,680 14420

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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1,523,726 + -0.7
1,523,776 - +0.3
1,523,779 - +1.4
1,523,795 - +0.7
1,524,047 - +0.3
1,524,120 + +0.3
1,524,160 + -0.8
1,524,162 - +0.8
1,524,208 - -0.2
1,524,226 + 14419 mRNA_6051 0.10 -1.6
1,524,230 + 14419 mRNA_6051 0.10 -0.1
1,524,232 + 14419 mRNA_6051 0.10 -0.8
1,524,313 - 14419 mRNA_6051 0.16 +0.9
1,524,624 + 14419 mRNA_6051 0.39 -0.6
1,524,671 - 14419 mRNA_6051 0.42 +0.3
1,524,694 + 14419 mRNA_6051 0.44 +1.4
1,524,786 + 14419 mRNA_6051 0.50 +1.3
1,524,941 + 14419 mRNA_6051 0.61 +2.0
1,524,953 + 14419 mRNA_6051 0.62 +0.4
1,524,957 - 14419 mRNA_6051 0.63 +1.5
1,524,969 - 14419 mRNA_6051 0.63 -3.0
1,525,093 - 14419 mRNA_6051 0.72 +0.2
1,525,147 - 14419 mRNA_6051 0.76 +0.5
1,525,253 + 14419 mRNA_6051 0.84 -0.8
1,525,264 - 14419 mRNA_6051 0.85 -1.5
1,525,410 - -4.2
1,525,677 - +0.3
1,525,679 + -0.2
1,525,684 + -0.6
1,525,703 - +0.6
1,525,708 + +0.1
1,525,715 - -0.6
1,525,809 - +0.7
1,525,839 - +0.6
1,525,840 - +0.8
1,525,844 - -4.4
1,525,846 + +2.3
1,526,216 + 14420 mRNA_6052 0.18 +0.6
1,526,277 - 14420 mRNA_6052 0.20 -1.0
1,526,286 - 14420 mRNA_6052 0.20 -0.3

Or see this region's nucleotide sequence