Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6148

Experiment: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14515 and 14516 are separated by 661 nucleotides14516 and 14517 are separated by 426 nucleotides mRNA_6147: 14515 - Hypothetical Protein, at 120,652 to 120,840 14515 mRNA_6148: 14516 - Hypothetical Protein, at 121,502 to 122,312 14516 mRNA_6149: 14517 - Hypothetical Protein, at 122,739 to 123,475 14517

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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120,640 - -0.4
120,932 - +1.5
121,112 - +0.3
121,207 - -0.1
121,216 + +0.5
121,333 + -0.8
121,445 + +1.6
121,780 + 14516 mRNA_6148 0.34 -0.4
122,081 - 14516 mRNA_6148 0.71 +1.7
122,082 + 14516 mRNA_6148 0.72 +2.2
122,195 - 14516 mRNA_6148 0.85 -0.7
122,497 + -0.3
122,706 - +1.5
122,781 - +0.4
122,790 - +0.8
122,800 + +0.9
122,854 + 14517 mRNA_6149 0.16 +0.0
122,955 - 14517 mRNA_6149 0.29 -2.0
123,260 - 14517 mRNA_6149 0.71 -0.6
123,266 + 14517 mRNA_6149 0.72 +0.2

Or see this region's nucleotide sequence