Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6219

Experiment: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14586 and 14587 are separated by 435 nucleotides mRNA_6218: 14586 - K03687 GRPE molecular chaperone GrpE, at 277,373 to 277,948 14586 mRNA_6219: 14587 - HMMPfam-Sec20-PF03908, at 278,384 to 280,109 14587

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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278,365 - -2.3
279,839 + 14587 mRNA_6219 0.84 -0.4
279,851 - 14587 mRNA_6219 0.85 -0.1
279,985 + -0.4
280,580 + -2.0
280,602 + -0.2

Or see this region's nucleotide sequence