Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6226

Experiment: Sorted Low BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14594 and 14595 are separated by 966 nucleotides mRNA_6226: 14594 - Hypothetical Protein, at 297,535 to 298,697 14594 mRNA_6227: 14595 - BLAST DEAD box helicase [Trichophyton violaceum], at 299,664 to 299,897 14595

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
remove
296,569 + -1.5
296,579 + -0.7
296,587 - -0.5
296,595 - -0.0
296,604 - -0.7
296,604 + -1.3
296,617 + -0.3
296,624 - +0.0
296,713 + -1.8
296,738 - -0.3
296,752 - -3.5
297,301 + -0.1
297,345 + -0.1
297,739 + 14594 mRNA_6226 0.18 -0.1
297,750 + 14594 mRNA_6226 0.18 +0.1
297,778 + 14594 mRNA_6226 0.21 +0.3
297,778 - 14594 mRNA_6226 0.21 +0.9
298,489 + 14594 mRNA_6226 0.82 +0.4
298,626 - +0.3
298,640 - -2.1
298,664 + +0.1
298,755 + -0.8
298,756 - -0.9
298,757 + -0.5
298,764 + -0.2
298,953 + -1.3
299,024 + -0.7
299,095 - +1.7
299,099 - +0.7
299,105 + -1.0
299,105 - +0.5
299,106 + -2.7
299,147 - -0.1
299,151 + -0.8
299,159 - +0.3
299,160 + +0.7
299,205 + -0.3
299,207 - -1.8
299,230 + +0.0

Or see this region's nucleotide sequence