Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6752

Experiment: Sorted Low BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15119 and 15120 are separated by 219 nucleotides mRNA_6751: 15119 - K10578 UBE2J1, NCUBE1, UBC6 ubiquitin-conjugating enzyme E2 J1, at 57,250 to 58,945 15119 mRNA_6752: 15120 - Hypothetical Protein, at 59,165 to 59,914 15120

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
remove
58,173 - 15119 mRNA_6751 0.54 +0.1
58,771 + 15119 mRNA_6751 0.90 -1.5
59,132 - -1.3
59,529 + 15120 mRNA_6752 0.49 +0.2
59,542 + 15120 mRNA_6752 0.50 -0.1
59,655 - 15120 mRNA_6752 0.65 +1.0
59,676 + 15120 mRNA_6752 0.68 -0.5
59,792 - 15120 mRNA_6752 0.84 -1.5
59,814 - 15120 mRNA_6752 0.87 +0.0
59,850 - +0.6
59,941 + +0.3
59,947 + +1.5
59,980 + +0.2
60,153 - -1.7
60,231 - -0.1
60,270 + -0.3
60,544 - -1.1
60,545 + -2.3
60,572 + -1.1
60,682 + -0.4
60,805 - -0.5
60,856 - -0.7
60,867 + -1.4

Or see this region's nucleotide sequence