Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6879

Experiment: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15247 and 15248 are separated by 918 nucleotides mRNA_6879: 15247 - KOG0293 WD40 repeat-containing protein, at 339,326 to 341,674 15247 mRNA_6880: 15248 - K00641 metX homoserine O-acetyltransferase, at 342,593 to 344,205 15248

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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338,375 - -2.8
338,453 - +0.3
338,617 - +2.2
338,641 - +0.5
338,654 - -0.4
338,971 - -0.5
339,224 + +0.7
339,566 + 15247 mRNA_6879 0.10 +0.5
339,674 + 15247 mRNA_6879 0.15 -1.5
339,816 - 15247 mRNA_6879 0.21 +0.9
340,179 - 15247 mRNA_6879 0.36 -1.2
340,301 - 15247 mRNA_6879 0.42 -0.5
340,412 - 15247 mRNA_6879 0.46 -0.1
340,830 - 15247 mRNA_6879 0.64 +0.2
341,164 - 15247 mRNA_6879 0.78 -0.6
341,289 + 15247 mRNA_6879 0.84 +1.2
341,413 - 15247 mRNA_6879 0.89 -0.4
341,444 + +1.6
341,596 + +0.1
341,607 - -1.8
341,730 - +0.1
341,741 + -1.7
341,752 - -1.4
341,756 + -0.6
341,904 + -1.6
342,053 + -2.5
342,058 + -2.1
342,188 - +1.0
342,188 - -0.2
342,195 + -1.8
342,198 - +0.4
342,211 + +1.2
342,233 + -0.5
342,347 + +0.2
342,347 + +0.3
342,357 - -1.8
342,361 - -1.0
342,371 + -0.5
342,508 - +0.7
342,533 + -2.4
342,636 - -0.1
342,660 + -1.8

Or see this region's nucleotide sequence