Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7191

Experiment: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15558 and 15559 are separated by 356 nucleotides15559 and 15560 are separated by 277 nucleotides mRNA_7190: 15558 - Hypothetical Protein, at 1,085,338 to 1,086,300 15558 mRNA_7191: 15559 - Hypothetical Protein, at 1,086,657 to 1,088,494 15559 mRNA_7192: 15560 - Hypothetical Protein, at 1,088,772 to 1,091,031 15560

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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1,085,994 + 15558 mRNA_7190 0.68 +0.6
1,086,246 + +3.2
1,087,941 - 15559 mRNA_7191 0.70 -0.7
1,088,803 + -0.6
1,088,935 + +0.4

Or see this region's nucleotide sequence