Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7239

Experiment: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15606 and 15607 are separated by 560 nucleotides15607 and 15608 are separated by 354 nucleotides mRNA_7238: 15606 - Hypothetical Protein, at 1,196,302 to 1,197,931 15606 mRNA_7239: 15607 - Hypothetical Protein, at 1,198,492 to 1,200,248 15607 mRNA_7240: 15608 - Hypothetical Protein, at 1,200,603 to 1,202,744 15608

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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1,198,088 - +0.5
1,198,097 + +1.1
1,198,115 + +0.1
1,198,220 - +0.2
1,198,316 + -0.3
1,198,319 - +0.4
1,198,361 + -2.5
1,198,364 + +0.1
1,198,372 - +0.2
1,198,383 - -1.7
1,198,393 + -0.3
1,198,526 + -0.0
1,198,534 - +0.1
1,198,544 + -0.6
1,198,551 - -0.9
1,198,802 + 15607 mRNA_7239 0.18 +1.1
1,198,813 + 15607 mRNA_7239 0.18 -1.7
1,198,842 + 15607 mRNA_7239 0.20 +0.9
1,198,915 - 15607 mRNA_7239 0.24 -0.1
1,199,588 + 15607 mRNA_7239 0.62 -0.4
1,200,121 + +0.2
1,200,274 - -0.4
1,200,517 + -1.3
1,200,618 + -0.8
1,200,817 - +0.2
1,201,246 - 15608 mRNA_7240 0.30 -0.9

Or see this region's nucleotide sequence