Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7444

Experiment: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15811 and 15812 are separated by 166 nucleotides15812 and 15813 are separated by 236 nucleotides mRNA_7443: 15811 - Hypothetical Protein, at 290,830 to 292,138 15811 mRNA_7444: 15812 - Hypothetical Protein, at 292,305 to 293,773 15812 mRNA_7445: 15813 - Hypothetical Protein, at 294,010 to 294,708 15813

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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291,377 + 15811 mRNA_7443 0.42 -0.3
291,658 + 15811 mRNA_7443 0.63 +0.4
291,808 - 15811 mRNA_7443 0.75 -1.7
292,221 - +0.3
292,827 + 15812 mRNA_7444 0.36 -1.8
292,981 + 15812 mRNA_7444 0.46 +0.0
293,119 + 15812 mRNA_7444 0.55 -1.1
293,293 + 15812 mRNA_7444 0.67 -0.9
293,848 - +0.3
294,275 - 15813 mRNA_7445 0.38 +0.6
294,426 - 15813 mRNA_7445 0.60 -1.1
294,556 - 15813 mRNA_7445 0.78 +0.0
294,578 + 15813 mRNA_7445 0.81 -0.4
294,603 - 15813 mRNA_7445 0.85 +0.9
294,606 - 15813 mRNA_7445 0.85 +0.5
294,632 + 15813 mRNA_7445 0.89 -1.5
294,726 - +1.3
294,743 + +0.6
294,745 + +0.6

Or see this region's nucleotide sequence