Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7501

Experiment: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_7501: 15869 - Hypothetical Protein, at 440,741 to 441,957 15869

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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439,749 - -0.3
439,755 + -0.6
439,873 - +0.2
439,901 - -0.5
440,614 + -1.1
440,624 - -0.1
441,377 - 15869 mRNA_7501 0.52 -1.8
441,511 - 15869 mRNA_7501 0.63 -2.3
441,652 - 15869 mRNA_7501 0.75 -1.4
441,666 + 15869 mRNA_7501 0.76 +1.0
441,732 - 15869 mRNA_7501 0.81 -0.6
441,785 + 15869 mRNA_7501 0.86 +0.1
441,924 - -0.2
441,934 - -1.3
441,937 + -1.1
441,944 + +0.2
442,123 + +1.5
442,127 - -1.0
442,234 - +0.0
442,234 - -2.5
442,268 + +0.0
442,427 - -2.3
442,429 - -1.6
442,456 + -2.3
442,506 + -0.5
442,643 - -0.9
442,697 + +0.1
442,700 + -0.6
442,798 - -3.5
442,851 - +0.8
442,866 + +0.6
442,881 - -0.6

Or see this region's nucleotide sequence