Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7617

Experiment: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15984 and 15985 are separated by 597 nucleotides mRNA_7616: 15984 - K00706 E2.4.1.34 1,3-beta-glucan synthase, at 684,881 to 690,807 15984 mRNA_7617: 15985 - Hypothetical Protein, at 691,405 to 692,628 15985

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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690,893 + -2.8
691,065 + +0.1
691,073 - +0.8
691,101 + +0.9
691,114 + -2.1
691,164 - +0.0
691,185 + +0.8
691,220 + -1.1
691,239 - +0.6
691,264 + -2.5
691,265 - -0.7
691,354 - -1.2
691,369 - -0.3
691,469 + -1.7
691,629 + 15985 mRNA_7617 0.18 +0.5
691,715 + 15985 mRNA_7617 0.25 -0.2
691,735 + 15985 mRNA_7617 0.27 +0.2
691,799 - 15985 mRNA_7617 0.32 -0.6
691,808 - 15985 mRNA_7617 0.33 +0.2
691,831 + 15985 mRNA_7617 0.35 -0.2
692,003 + 15985 mRNA_7617 0.49 -3.3
692,039 - 15985 mRNA_7617 0.52 +0.2
692,183 - 15985 mRNA_7617 0.64 +0.3
692,245 + 15985 mRNA_7617 0.69 -2.1
692,461 + 15985 mRNA_7617 0.86 +0.7
692,508 - +0.3
692,619 + +1.4
692,629 + -0.6
692,637 + +0.4
692,752 + -0.3
692,764 - -0.6
692,775 + +0.9
692,781 - +0.8
692,783 - +0.3
692,791 - -0.6
692,796 - -0.9
692,806 + -0.5
692,806 + -0.5
692,815 + -1.9
692,818 - -2.5
692,820 - -1.8
692,822 + +0.2
692,822 - +0.1
692,824 + +0.1
692,824 - +2.0
692,830 + -0.6
692,831 + +0.4
692,831 + +0.3
692,836 + -0.8
692,837 + -0.5
692,839 + -0.2
692,841 - -1.5
692,844 - -0.7
692,846 - +0.4
692,847 + -4.1
692,851 + -0.5
692,851 + -0.3
692,851 + -1.4
692,853 - +2.4
692,853 - -1.1
692,853 + +0.4
692,869 + +0.1
692,869 + -0.2
692,877 + -0.1
692,880 - +1.2
692,888 + -0.7
692,889 - +0.2
692,890 + +1.2
692,892 - -0.5
692,893 + -1.3
692,898 - -2.4
692,901 - +0.6
692,902 - -0.1
692,902 - -1.2
692,903 - -1.2
692,914 - +0.1
692,962 - +0.3
692,982 + +1.4
693,001 - +1.9
693,011 + +0.3
693,028 - +0.3
693,037 - -1.8
693,041 + -0.6
693,043 + -3.6
693,049 - +0.5
693,060 - +0.8
693,063 + -1.2
693,073 + +0.9
693,077 + +1.1
693,102 + +0.2
693,181 + -0.7
693,186 + -0.2
693,190 - +0.1
693,192 - -3.7
693,192 - -1.4
693,193 + -1.1
693,197 + +1.8
693,197 - +0.1
693,198 + -2.0
693,200 + -0.7
693,201 - -3.1
693,203 + -2.5
693,213 + +0.7
693,214 + +0.5
693,219 - -0.9
693,223 + -0.5
693,232 + +0.1
693,233 - +0.2
693,242 - -2.0
693,244 - -1.5
693,244 - -0.2
693,255 - -2.6
693,271 + -0.4
693,277 + -0.5
693,286 - +0.0
693,287 + +0.8
693,291 - +0.4
693,297 - -0.4
693,305 - -0.6
693,312 + -0.6
693,315 + -0.6
693,326 - +1.0
693,330 - -0.1
693,344 - -2.3
693,349 + -0.0
693,370 + +0.7
693,375 - -0.1
693,379 - +0.4
693,383 - -1.5
693,389 + -1.7
693,390 - -1.2
693,400 - -0.5
693,401 - +0.5
693,401 + -2.4
693,408 - -1.0
693,413 + -0.8
693,416 + +0.7
693,419 - +0.2
693,424 + -0.4
693,436 + +1.6
693,437 + -2.1
693,445 + -0.9
693,453 + -1.4
693,457 + -0.5
693,461 - +0.9
693,465 - +0.3
693,465 - -0.8
693,466 - -1.9
693,466 - -0.9
693,467 + +1.7
693,468 - +0.5
693,473 + -2.2
693,478 - -2.4
693,479 + +1.5
693,492 + +0.2
693,499 - +0.2
693,499 - -0.1
693,500 + +0.2
693,532 + -1.8
693,541 + -0.2
693,613 + +1.3

Or see this region's nucleotide sequence