Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8033

Experiment: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16400 and 16401 are separated by 265 nucleotides mRNA_8032: 16400 - K14007 SEC24 protein transport protein SEC24, at 253,423 to 257,120 16400 mRNA_8033: 16401 - K08488 STX7 syntaxin 7, at 257,386 to 258,889 16401

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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257,260 - +0.0
257,277 - +0.5
257,278 - +1.6
257,279 - -0.7
259,015 - -0.6
259,044 + +0.6
259,145 - -3.0
259,147 - -0.8
259,164 + -0.4
259,196 - -0.0
259,202 - -1.4
259,225 - +0.6
259,289 - -2.3
259,289 + +0.2
259,342 - +0.5
259,438 - -0.0
259,441 - -0.5
259,479 - -2.3
259,481 + -1.4
259,494 + -0.2
259,577 - +1.5
259,636 + -1.5
259,657 + -1.8
259,658 - +0.2
259,660 - +1.7
259,660 + -0.1
259,661 + -1.8
259,699 - -1.2
259,701 + -0.6
259,721 - -0.6
259,726 + -2.4
259,743 + -0.4
259,858 - -3.4

Or see this region's nucleotide sequence