Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_281

Experiment: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 8649 and 8650 are separated by 948 nucleotides mRNA_281: 8649 - KOG0653 Cyclin B and related kinase-activating proteins, at 669,704 to 671,491 8649 mRNA_282: 8650 - Hypothetical Protein, at 672,440 to 673,215 8650

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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668,955 + +0.4
669,012 - -0.6
669,015 - -0.6
669,423 - -0.8
669,424 + -0.7
669,565 - +0.0
669,571 + -0.8
669,705 - -0.1
671,498 - -0.1
671,498 - +0.5
671,509 - +0.4
671,537 + -1.0
671,561 - -1.3
671,564 + -2.1
671,665 - -0.5
671,674 - -0.5
671,681 + -0.4
671,681 - -2.3
671,694 + +1.1
671,694 + -0.7
671,700 - -0.0
671,704 + -0.4
671,825 + +1.5
671,843 + +0.4
671,845 - -0.9
671,846 - -0.0
671,848 + -1.4
671,850 - +0.4
671,854 + +0.0
671,863 - -2.2
671,866 - -0.1
671,866 + -0.5
671,866 + -0.4
671,867 - -1.1
671,873 + +0.2
671,875 - -0.2
671,875 - +0.6
671,881 + -1.0
671,885 + -0.4
671,886 - -0.2
671,893 - +0.1
671,902 + -2.8
671,920 + -0.4
671,927 + -0.4
671,995 - -1.0
672,003 + +0.8
672,004 - -3.8
672,009 - -1.9
672,018 + -1.0
672,023 - -1.3
672,029 - -0.5
672,029 + -1.4
672,038 - +0.6
672,044 - -0.9
672,044 + -2.0
672,045 + -3.0
672,049 + +0.1
672,058 - +0.2
672,139 - +0.2
672,146 + +0.3
672,164 + +0.2
672,165 - +0.5
672,165 - -0.9
672,169 - -0.0
672,175 - -0.2
672,190 - +0.3
672,276 + -1.2
672,293 - -0.8
672,309 + +1.5
672,320 - -0.6
672,331 + -0.3
672,336 - -0.4
672,357 + -0.3
672,360 + +1.1
672,363 + -0.9
672,372 - +0.5
672,375 + +0.9
672,376 - -0.2
672,379 + -0.6
672,379 + +0.2
672,386 + -0.4
672,395 + -0.4
672,399 + -0.0
672,403 - -0.8
672,430 - -0.7
672,479 + -1.9

Or see this region's nucleotide sequence