Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_306

Experiment: Sorted Low BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 8673 and 8674 are separated by 490 nucleotides8674 and 8675 are separated by 343 nucleotides mRNA_305: 8673 - HMMPfam-Peroxisomal biogenesis factor 11 (PEX11)-PF05648, at 726,265 to 727,388 8673 mRNA_306: 8674 - HMMPfam-Relaxase/Mobilisation nuclease domain-PF03432,ProSiteProfiles-Tudor domain profile.-PS50304,SMART-Tudor domain-SM00333,SUPERFAMILY--SSF63748, at 727,879 to 728,992 8674 mRNA_307: 8675 - K12195 CHMP6, VPS20 charged multivesicular body protein 6, at 729,336 to 730,471 8675

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
remove
727,311 - -0.9
727,454 + -0.0
729,016 - -1.3
729,047 + -0.6
729,134 + +0.7
729,149 + -0.5
729,303 - +1.5
729,309 + +0.0
729,310 - +0.3
729,333 - -0.7
729,347 - -3.1
729,714 - 8675 mRNA_307 0.33 -0.9

Or see this region's nucleotide sequence