Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_457

Experiment: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 8824 and 8825 are separated by 461 nucleotides8825 and 8826 are separated by 309 nucleotides mRNA_456: 8824 - Hypothetical Protein, at 1,062,231 to 1,064,186 8824 mRNA_457: 8825 - K14963 WDR5, SWD3, CPS30 COMPASS component SWD3, at 1,064,648 to 1,065,964 8825 mRNA_458: 8826 - KOG2676 Uncharacterized conserved protein, at 1,066,274 to 1,068,450 8826

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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1,064,110 + +2.4
1,064,414 - -3.6
1,066,090 + -1.5
1,066,100 + +0.0
1,066,101 + -2.1
1,066,225 - +0.0
1,066,229 - +0.7
1,066,232 - -0.0
1,066,247 + +0.1

Or see this region's nucleotide sequence