Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_608

Experiment: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 8976 and 8977 are separated by 555 nucleotides mRNA_608: 8976 - K09490 HSPA5, BIP heat shock 70kDa protein 5, at 1,462,266 to 1,464,196 8976 mRNA_609: 8977 - K19001 HELLS, DDM1 ATP-dependent DNA helicase, at 1,464,752 to 1,468,761 8977

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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1,461,478 - -0.7
1,461,623 + +0.8
1,461,767 - +0.3
1,461,768 + -0.7
1,461,776 - -0.6
1,461,776 - -2.4
1,461,792 + -2.0
1,461,794 - +1.9
1,464,660 + +1.3
1,464,661 - -0.2
1,464,675 - +0.9
1,464,688 - -1.9
1,464,713 + -0.1
1,464,723 + +0.1
1,464,833 - -1.2
1,464,840 + -1.8
1,464,856 + +0.3
1,464,985 + +0.2
1,464,988 + -0.3

Or see this region's nucleotide sequence