Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_631

Experiment: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 8998 and 8999 are separated by 873 nucleotides mRNA_630: 8998 - K10088 OS9 protein OS-9, at 1,511,055 to 1,513,202 8998 mRNA_631: 8999 - Hypothetical Protein, at 1,514,076 to 1,515,222 8999

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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1,513,125 - -0.4
1,513,426 - +1.8
1,513,433 - +0.9
1,513,450 - -1.3
1,513,559 - +0.1
1,513,629 + -1.0
1,513,684 - -1.8
1,513,716 + -0.3
1,513,717 + +0.2
1,513,724 + -0.6
1,513,738 + -0.2
1,513,744 + -0.4
1,513,863 - +1.6
1,513,914 - -0.7
1,513,943 - +0.6
1,513,978 - -0.4
1,514,044 - -0.1
1,514,047 + +0.1
1,514,120 - +1.4
1,514,138 + -0.9
1,514,163 - -0.9
1,514,169 + -0.0
1,514,173 - +0.5
1,514,181 - +0.5
1,514,187 - +1.7
1,514,188 + -1.2
1,514,190 + +0.6
1,514,202 - 8999 mRNA_631 0.11 +0.3
1,514,206 + 8999 mRNA_631 0.11 -1.1
1,514,213 + 8999 mRNA_631 0.12 -0.3
1,514,394 + 8999 mRNA_631 0.28 -0.7
1,514,940 - 8999 mRNA_631 0.75 -1.3
1,515,105 + 8999 mRNA_631 0.90 +1.3
1,515,309 + -1.3
1,515,350 - -0.5
1,515,523 - +0.1
1,515,785 - +0.0
1,515,845 + -1.1
1,515,853 - -0.7
1,515,856 - -0.7
1,515,859 + -0.1
1,515,861 - +0.8
1,516,012 + -3.7
1,516,018 - -2.5
1,516,140 - -3.5
1,516,151 + -2.4

Or see this region's nucleotide sequence