Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_800

Experiment: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9167 and 9168 are separated by 450 nucleotides9168 and 9169 are separated by 214 nucleotides mRNA_799: 9167 - K01893 NARS, asnS asparaginyl-tRNA synthetase, at 1,901,722 to 1,903,948 9167 mRNA_800: 9168 - K10418 DYNLL dynein light chain LC8-type, at 1,904,399 to 1,905,250 9168 mRNA_801: 9169 - SUPERFAMILY--SSF52047, at 1,905,465 to 1,906,798 9169

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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1,904,005 + -1.1
1,904,274 + -0.3
1,904,288 + +0.8
1,905,063 + 9168 mRNA_800 0.78 +1.1
1,905,440 - -0.7
1,905,446 + +0.7
1,905,447 - -0.9
1,905,454 + +0.3
1,905,566 - -1.1
1,906,005 - 9169 mRNA_801 0.40 -1.2
1,906,039 + 9169 mRNA_801 0.43 +0.3
1,906,140 + 9169 mRNA_801 0.51 +0.6

Or see this region's nucleotide sequence